In 2025, as in previous years, EGA has facilitated the reuse of numerous datasets spanning a broad range of research and healthcare topics. To reflect on this activity, we would like to highlight the top 10 studies behind the most requested datasets of last year. Notably, the vast majority of these highly requested datasets are cancer-focused, particularly involving the study of immune checkpoint inhibitor therapies.
Immune checkpoint inhibitors (ICIs) have become one of the most transformative advances in modern cancer therapy. These monoclonal antibodies enhance antitumor immune responses by targeting inhibitory immune checkpoint molecules. While ICIs have led to remarkably favorable and durable responses in some patients, treatment outcomes vary widely. This variability has fueled intense research efforts aimed at understanding resistance mechanisms, exploring combination therapies, and discovering predictive biomarkers to better stratify patients and guide treatment decisions.
| Study | Title | Disease | |
|---|---|---|---|
| 1 | EGAS00001005503 | Integrated genomic analyses reveal molecular correlates of clinical response and resistance to atezolizumab in combination with bevacizumab in advanced hepatocellular carcinoma | Liver Cancer |
| 2 | EGAS00001005013 | Intratumoral plasma cells predict outcomes to PD-L1 blockade in non-small cell lung cancer | Lung Cancer |
| 3 | EGAS00001004809 | BIOKEY: A single-cell catalogue of the dynamic changes underlying Checkpoint Immunotherapy response in Early Breast Cancer | Breast Cancer |
| 4 | EGAS50000000138 | BIOKEY: Immune heterogeneity in small cell lung cancer and vulnerability to immune checkpoint blockade | Lung Cancer |
| 5 | EGAS50000000497 | Bladder cancer subtyping study across 4 atezo clinical trials | Bladder Cancer |
| 6 | EGAS50000000689 | MOSAIC - Multi-Omics Spatial Atlas In Cancer | Cancer Atlas |
| 7 | EGAS00000000083 | METABRIC (Breast cancer - genome and transcriptome) | Breast Cancer |
| 8 | EGAS00001005702 | Human genomic and phenotypic synthetic data for the study of rare diseases | Synthetic data |
| 9 | EGAS00001002556 | TGF-β attenuates tumour response to PD-L1 blockade by contributing to exclusion of T cells | Bladder Cancer |
| 10 | EGAS00001004353 | Molecular subsets in renal cancer determine outcome to checkpoint and angiogenesis blockade | Renal Cancer |
The most requested dataset of the year was EGAD00001008128. It belongs to a study that analyzed 358 liver cancer patients enrolled in clinical trials and treated with the combination of atezolizumab (anti–PD-L1) and bevacizumab (anti-VEGF), atezolizumab alone, or sorafenib. The study highlights how bevacizumab enhances anti-PD-L1 effect and identifies candidate biomarkers to predict treatment response.
Hepatocellular carcinoma (HCC) is the most common type of primary liver cancer and the third leading cause of cancer-related death worldwide [1]. Because symptoms often appear late, many patients are diagnosed at advanced stages, when curative options are no longer viable. For many years, sorafenib—a multikinase inhibitor approved in 2007—was the only systemic treatment available. Although numerous clinical trials followed, it was not until a decade later that additional therapies showed meaningful clinical benefit. Among these advances, immunotherapy emerged as a promising first-line option [2].
In particular, the combination of atezolizumab and bevacizumab demonstrated improved survival in patients with advanced HCC, reshaping the treatment landscape. However, treatment efficacy remains limited by the complex and diverse hepatic microenvironments that influence immune responses, as well as by high intratumoral heterogeneity. Identifying robust predictors of treatment response is critical to enable effective patient stratification and maximize the benefits of these therapies [2].
The continued demand for these datasets highlights the interest and critical role of data reuse in deepening our understanding of cancer, accelerating the development of more effective therapies, and improving patient outcomes. By providing secure access to high-quality genomic and clinical data, EGA acts as a catalyst for biomedical progress.
References
- Sung, Hyuna, et al. "Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries."CA: a cancer journal for clinicians 71.3 (2021): 209-249.
- Ladd, Alexandra D, et al.“Mechanisms of drug resistance in HCC.” Hepatology 79(4) (2024): 926-940